UPF3B gene

UPF3B regulator of nonsense mediated mRNA decay

The information on this page was automatically extracted from online scientific databases.

From NCBI Gene:

This gene encodes a protein that is part of a post-splicing multiprotein complex involved in both mRNA nuclear export and mRNA surveillance. The encoded protein is one of two functional homologs to yeast Upf3p. mRNA surveillance detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD). When translation ends upstream from the last exon-exon junction, this triggers NMD to degrade mRNAs containing premature stop codons. This protein binds to the mRNA and remains bound after nuclear export, acting as a nucleocytoplasmic shuttling protein. It forms with Y14 a complex that binds specifically 20 nt upstream of exon-exon junctions. This gene is located on the long arm of chromosome X. Two splice variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

From UniProt:

Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. In cooperation with UPF2 stimulates both ATPase and RNA helicase activities of UPF1. Binds spliced mRNA upstream of exon-exon junctions. In vitro, stimulates translation; the function is independent of association with UPF2 and components of the EJC core.

Covered on Genetics Home Reference:

From NCBI Gene:

  • Mental retardation, syndromic 14, X-linked

From UniProt:

Mental retardation, X-linked, syndromic, 14 (MRXS14): A disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptive behavior and manifested during the developmental period. MRXS14 patients manifest mental retardation associated with other variable signs such as autistic features, slender build, poor musculature, long, thin face, high-arched palate, high nasal bridge, and pectus deformities. [MIM:300676]

Cytogenetic Location: Xq24, which is the long (q) arm of the X chromosome at position 24

Molecular Location: base pairs 119,805,311 to 119,853,028 on the X chromosome (Homo sapiens Updated Annotation Release 109.20200522, GRCh38.p13) (NCBI)

Cytogenetic Location: Xq24, which is the long (q) arm of the X chromosome at position 24
  • HUPF3B
  • MRX62
  • MRX82
  • MRXS14
  • RENT3B
  • UPF3BP1
  • UPF3BP2
  • UPF3BP3
  • Upf3p-X
  • UPF3X