KDM5C gene

lysine demethylase 5C

The information on this page was automatically extracted from online scientific databases.

From NCBI Gene:

This gene is a member of the SMCY homolog family and encodes a protein with one ARID domain, one JmjC domain, one JmjN domain and two PHD-type zinc fingers. The DNA-binding motifs suggest this protein is involved in the regulation of transcription and chromatin remodeling. Mutations in this gene have been associated with X-linked mental retardation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009]

From UniProt:

Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys-27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Participates in transcriptional repression of neuronal genes by recruiting histone deacetylases and REST at neuron-restrictive silencer elements. Represses the CLOCK-ARNTL/BMAL1 heterodimer-mediated transcriptional activation of the core clock component PER2.

From NCBI Gene:

  • Mental retardation, syndromic, Claes-Jensen type, X-linked

From UniProt:

Mental retardation, X-linked, syndromic, Claes-Jensen type (MRXSCJ): A disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptive behavior and manifested during the developmental period. MRXSCJ patients manifest mental retardation associated with variable features such as slowly progressive spastic paraplegia, seizures, facial dysmorphism. [MIM:300534]

Cytogenetic Location: Xp11.22-p11.21, which is the short (p) arm of the X chromosome between positions 11.22 and 11.21

Molecular Location: base pairs 53,159,735 to 53,225,422 on the X chromosome (Homo sapiens Annotation Release 108, GRCh38.p7) (NCBI)

Cytogenetic Location: Xp11.22-p11.21, which is the short (p) arm of the X chromosome between positions 11.22 and 11.21
  • DXS1272E
  • JARID1C
  • MRX13
  • MRXJ
  • MRXSCJ
  • MRXSJ
  • SMCX
  • XE169