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Reviewed January 2015

What is the official name of the GNAT2 gene?

The official name of this gene is “guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.”

GNAT2 is the gene's official symbol. The GNAT2 gene is also known by other names, listed below.

Read more about gene names and symbols on the About page.

What is the normal function of the GNAT2 gene?

The GNAT2 gene provides instructions for making one part (called the cone-specific alpha subunit) of a protein called transducin. This protein is found in light-detecting (photoreceptor) cells called cones, which are located in a specialized tissue at the back of the eye known as the retina. Cones provide vision in bright light (daylight vision), including color vision. Other photoreceptor cells, called rods, provide vision in low light (night vision).

Transducin plays an essential role in transmitting visual signals from photoreceptor cells in the retina to the brain through a process called phototransduction. Photoreceptors contain special pigments (called photopigments) that absorb light. The photopigments activate transducin, which triggers a series of chemical reactions within the cell. These reactions alter the cell's electrical charge, ultimately generating a signal that is interpreted by the brain as vision.

How are changes in the GNAT2 gene related to health conditions?

achromatopsia - caused by mutations in the GNAT2 gene

At least 10 mutations in the GNAT2 gene have been found to cause the vision disorder achromatopsia. These mutations are a relatively uncommon cause of complete achromatopsia, a form of the disorder characterized by a total lack of color vision and other vision problems that are present from early infancy. GNAT2 gene mutations have also been identified in a few individuals with incomplete achromatopsia, a milder form of the disorder associated with limited color vision.

The GNAT2 gene mutations that underlie complete achromatopsia lead to an abnormally small, nonfunctional version of the cone-specific alpha subunit of transducin. Without this subunit, cones have no functional transducin, and they are unable to carry out phototransduction. (The subunit produced from the GNAT2 gene is specific to cones, so rods are typically unaffected by this disorder.) A loss of cone function underlies the lack of color vision and other vision problems in people with complete achromatopsia.

At least one known GNAT2 gene mutation causes incomplete achromatopsia. The mutation, which is written as c.461+2G>A, affects the way the gene's instructions are pieced together to form the subunit protein. This mutation allows the production of some functional cone-specific alpha subunit, although the amount of the subunit is greatly reduced. As a result, a small amount of functional transducin is available to play its role in phototransduction, and the partially functioning cones can transmit some visual information to the brain.

Where is the GNAT2 gene located?

Cytogenetic Location: 1p13.1

Molecular Location on chromosome 1: base pairs 109,602,906 to 109,619,662

(Homo sapiens Annotation Release 107, GRCh38.p2) (NCBIThis link leads to a site outside Genetics Home Reference.)

The GNAT2 gene is located on the short (p) arm of chromosome 1 at position 13.1.

The GNAT2 gene is located on the short (p) arm of chromosome 1 at position 13.1.

More precisely, the GNAT2 gene is located from base pair 109,602,906 to base pair 109,619,662 on chromosome 1.

See How do geneticists indicate the location of a gene? in the Handbook.

Where can I find additional information about GNAT2?

You and your healthcare professional may find the following resources about GNAT2 helpful.

You may also be interested in these resources, which are designed for genetics professionals and researchers.

What other names do people use for the GNAT2 gene or gene products?

  • ACHM4
  • cone-type transducin alpha subunit
  • guanine nucleotide binding protein, alpha transducing activity polypeptide 2
  • transducin alpha-2 chain
  • transducin, cone-specific, alpha polypeptide

Where can I find general information about genes?

The Handbook provides basic information about genetics in clear language.

These links provide additional genetics resources that may be useful.

What glossary definitions help with understanding GNAT2?

achromatopsia ; cell ; cones ; gene ; guanine ; mutation ; nucleotide ; photoreceptor ; protein ; retina ; rods ; subunit ; tissue

You may find definitions for these and many other terms in the Genetics Home Reference Glossary.

See also Understanding Medical Terminology.

References (8 links)


The resources on this site should not be used as a substitute for professional medical care or advice. Users seeking information about a personal genetic disease, syndrome, or condition should consult with a qualified healthcare professional. See How can I find a genetics professional in my area? in the Handbook.

Reviewed: January 2015
Published: February 8, 2016