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Reviewed June 2015

What is the official name of the CDKN1C gene?

The official name of this gene is “cyclin-dependent kinase inhibitor 1C (p57, Kip2).”

CDKN1C is the gene's official symbol. The CDKN1C gene is also known by other names, listed below.

Read more about gene names and symbols on the About page.

What is the normal function of the CDKN1C gene?

The CDKN1C gene provides instructions for making a protein that helps regulate growth. This protein acts as a tumor suppressor, which means that it keeps cells from growing and dividing too fast or in an uncontrolled way. It also is involved in controlling growth before birth, preventing the developing fetus from becoming too large.

People inherit one copy of most genes from their mother and one copy from their father. Both copies are typically active, or "turned on," in cells. However, the activity of the CDKN1C gene depends on which parent it was inherited from. In most tissues, the copy of the gene inherited from a person's mother (the maternally inherited copy) has much higher activity than the copy inherited from the father (the paternally inherited copy). This sort of parent-specific difference in gene activation is caused by a phenomenon called genomic imprinting.

CDKN1C is part of a cluster of genes on the short (p) arm of chromosome 11 that undergo genomic imprinting. A nearby region of DNA known as imprinting center 2 (IC2) or KvDMR controls the parent-specific genomic imprinting of CDKN1C and several other genes thought to help regulate growth. The IC2 region undergoes a process called methylation, which is a chemical reaction that attaches small molecules called methyl groups to certain segments of DNA. Methylation, which occurs during the formation of an egg or sperm cell, is a way of marking or "stamping" the parent of origin. The IC2 region is normally methylated only on the maternally inherited copy of chromosome 11.

How are changes in the CDKN1C gene related to health conditions?

Beckwith-Wiedemann syndrome - caused by mutations in the CDKN1C gene

Beckwith-Wiedemann syndrome is a condition that causes overgrowth and has other signs and symptoms that affect many parts of the body. At least half of all cases of Beckwith-Wiedemann syndrome result from changes in methylation of the IC2 region. Specifically, the maternally inherited copy of the IC2 region has too few methyl groups attached (hypomethylation). This abnormality disrupts the regulation of several genes that are normally controlled by IC2, including CDKN1C. Because this gene normally restrains cell growth and division, a reduction in its activity leads to overgrowth and the other features of Beckwith-Wiedemann syndrome.

In a few cases, Beckwith-Wiedemann syndrome has been caused by deletions of a small amount of DNA from the maternally inherited copy of the IC2 region. Like abnormal methylation, these deletions disrupt the activity of several genes, including CDKN1C.

Beckwith-Wiedemann syndrome can also result from mutations within the maternally inherited copy of the CDKN1C gene. More than two dozen such mutations have been identified. Some of these genetic changes lead to an abnormally short, nonfunctional version of the CDKN1C protein, while others alter single protein building blocks (amino acids) or delete a small number of amino acids from the protein. All of these mutations are described as "loss-of-function" because they alter the structure of the CDKN1C protein such that it can no longer control growth effectively. The resulting problems with growth regulation lead to overgrowth and the other features of Beckwith-Wiedemann syndrome.

intrauterine growth restriction, metaphyseal dysplasia, adrenal hypoplasia congenita, and genital anomalies - caused by mutations in the CDKN1C gene

Intrauterine growth restriction, metaphyseal dysplasia, adrenal hypoplasia congenita, and genital anomalies, commonly known by the acronym IMAGe, is a rare syndrome that affects the growth of many parts of the body. The condition is characterized by slow growth before and after birth, skeletal abnormalities, hormonal changes, and genital abnormalities in males. At least six mutations in the CDKN1C gene have been found to cause this condition. Because this gene is paternally imprinted, IMAGe syndrome results only when the mutation is present on the maternally inherited copy of the gene.

The CDKN1C gene mutations that cause IMAGe syndrome replace single amino acids in a region known as the proliferating cell nuclear antigen (PCNA)-binding domain near the end of the gene. These mutations appear to increase the stability of the CDKN1C protein, preventing it from being broken down normally. These changes increase the amount of the protein that is available to restrain cell growth and division. Because these mutations enhance the protein's usual function, they are described as "gain-of-function." The excess CDKN1C protein leads to IMAGe syndrome by impairing normal growth and development starting before birth.

Where is the CDKN1C gene located?

Cytogenetic Location: 11p15.5

Molecular Location on chromosome 11: base pairs 2,883,218 to 2,885,816

(Homo sapiens Annotation Release 107, GRCh38.p2) (NCBIThis link leads to a site outside Genetics Home Reference.)

The CDKN1C gene is located on the short (p) arm of chromosome 11 at position 15.5.

The CDKN1C gene is located on the short (p) arm of chromosome 11 at position 15.5.

More precisely, the CDKN1C gene is located from base pair 2,883,218 to base pair 2,885,816 on chromosome 11.

See How do geneticists indicate the location of a gene? in the Handbook.

Where can I find additional information about CDKN1C?

You and your healthcare professional may find the following resources about CDKN1C helpful.

You may also be interested in these resources, which are designed for genetics professionals and researchers.

What other names do people use for the CDKN1C gene or gene products?

  • BWCR
  • cyclin-dependent kinase inhibitor 1C
  • cyclin-dependent kinase inhibitor p57
  • KIP2
  • p57
  • p57KIP2

Where can I find general information about genes?

The Handbook provides basic information about genetics in clear language.

These links provide additional genetics resources that may be useful.

What glossary definitions help with understanding CDKN1C?

acids ; cell ; chromosome ; DNA ; domain ; dysplasia ; egg ; epigenetic ; fetus ; gene ; hypoplasia ; imprinting ; inherit ; inherited ; kinase ; methyl ; methylation ; mutation ; proliferating ; protein ; sperm ; syndrome ; tumor

You may find definitions for these and many other terms in the Genetics Home Reference Glossary.

See also Understanding Medical Terminology.

References (9 links)


The resources on this site should not be used as a substitute for professional medical care or advice. Users seeking information about a personal genetic disease, syndrome, or condition should consult with a qualified healthcare professional. See How can I find a genetics professional in my area? in the Handbook.

Reviewed: June 2015
Published: February 8, 2016